#include <set.h>

Inheritance diagram for oofem::Set:

Collaboration diagram for oofem::Set:

Public Member Functions
	Set (int n, Domain *d)
virtual	~Set ()
void	initializeFrom (InputRecord &ir) override
void	giveInputRecord (DynamicInputRecord &input) override
const IntArray &	giveElementList ()
const IntArray &	giveBoundaryList ()
const IntArray &	giveEdgeList ()
const IntArray &	giveSurfaceList ()
const IntArray &	giveInternalElementDofManagerList ()
const IntArray &	giveNodeList ()
const IntArray &	giveSpecifiedNodeList ()
void	setElementList (IntArray newElements)
void	setBoundaryList (IntArray newBoundaries)
void	setEdgeList (IntArray newEdges)
void	setNodeList (IntArray newNodes)
void	clear ()
void	addAllElements ()
bool	hasElement (int elem) const
	Return True if given element is contained.
std::string	giveElementProperties () const
std::string	giveDofManProperties () const
void	updateLocalNumbering (EntityRenumberingFunctor &f) override
void	updateLocalNodeNumbering (EntityRenumberingFunctor &f)
void	updateLocalElementNumbering (EntityRenumberingFunctor &f)
void	saveContext (DataStream &stream, ContextMode mode) override
void	restoreContext (DataStream &stream, ContextMode mode) override
const char *	giveClassName () const override
const char *	giveInputRecordName () const override
Public Member Functions inherited from oofem::FEMComponent
	FEMComponent (int n, Domain *d)
virtual	~FEMComponent ()=default
	Virtual destructor.
Domain *	giveDomain () const
virtual void	setDomain (Domain *d)
int	giveNumber () const
void	setNumber (int num)
virtual void	initializeFrom (InputRecord &ir, int priority)
virtual void	initializeFinish ()
virtual void	postInitialize ()
	Performs post initialization steps. Called after all components are created and initialized.
virtual int	checkConsistency ()
virtual void	printOutputAt (FILE file, TimeStep tStep)
virtual void	printYourself ()
	Prints receiver state on stdout. Useful for debugging.
virtual Interface *	giveInterface (InterfaceType t)
std::string	errorInfo (const char *func) const
	Returns string for prepending output (used by error reporting macros).

Protected Member Functions
void	computeIntArray (IntArray &answer, const IntArray &specified, std ::list< Range >ranges)

Protected Attributes
IntArray	elements
	Element numbers.
bool	mElementListIsSorted
IntArray	mElementsSorted
IntArray	elementBoundaries
IntArray	elementEdges
	Element numbers + boundary numbers (interleaved).
IntArray	elementSurfaces
	Element numbers + edge numbers (interleaved).
IntArray	elementInternalNodes
	Element numbers + surface numbers (interleaved).
IntArray	nodes
	Element numbers + internal dof manager numbers (interleaved).
IntArray	totalNodes
	Unique set of nodes (computed).
std::string	elementprops
	Element properties.
std::string	dofmanprops
	Dof manager properties.
bool	nodalListInitialized = false
Protected Attributes inherited from oofem::FEMComponent
int	number
	Component number.
Domain *	domain
	Link to domain object, useful for communicating with other FEM components.

Detailed Description

Set of elements, boundaries, edges and/or nodes. Describes a collection of components which are given easy access to for example boundary conditions.

Note: bp: sets are defined using component labels (global numbers). In the initialization, the sets are resolved to local component numbers. In parallel mode (MPI), the sets are resolved to local component numbers on each processor, but set definition is TYPICALLY duplicated on all processors. In turn, the sets are resolved to local component numbers on each processor. As the set definition can contain global component, hat are not present on the processor, these entries are removed from the set during resolution process. To support also dynamic load balancing, the set resolution has to be done after each load balancing step and thus we need to keep the original set definition. This can be achieved by keeping the original input record of the set.

Author: Mikael Öhman

Definition at line 81 of file set.h.

Constructor & Destructor Documentation

◆ Set()

oofem::Set::Set	(	int	n,
		Domain *	d )

Creates a empty set with given number and belonging to given domain.

Parameters

n	Set number.
d	Domain to which component belongs to.

Definition at line 52 of file set.C.

References elementprops, oofem::FEMComponent::FEMComponent(), and mElementListIsSorted.

◆ ~Set()

virtual oofem::Set::~Set ( )

inlinevirtual

Definition at line 110 of file set.h.

Member Function Documentation

◆ addAllElements()

void oofem::Set::addAllElements ( )

Initialize the element set to contain all elements in the receiver domain

Definition at line 239 of file set.C.

References elements, oofem::FEMComponent::giveDomain(), and mElementListIsSorted.

Referenced by oofem::ZZErrorEstimator::estimateError(), oofem::InternalVariableField::evaluateAt(), oofem::VTKExportModule::exportIntVarAs(), and oofem::VTKExportModule::getDofManPrimaryVariable().

◆ clear()

void oofem::Set::clear ( )

Clears the entire set.

Definition at line 255 of file set.C.

References elementBoundaries, elementEdges, elementInternalNodes, elements, nodes, and totalNodes.

Referenced by oofem::DGProblem::constructBoundaryEntities().

◆ computeIntArray()

void oofem::Set::computeIntArray	(	IntArray &	answer,
		const IntArray &	specified,
		std ::list< Range >	ranges )

protected

Converts list ranges to list of individual values + individually specified values.

Definition at line 133 of file set.C.

References oofem::IntArray::at(), oofem::IntArray::findNonzeros(), oofem::IntArray::giveSize(), oofem::IntArray::maximum(), and oofem::IntArray::zero().

Referenced by initializeFrom().

◆ giveBoundaryList()

const IntArray & oofem::Set::giveBoundaryList ( )

Returns list of element boundaries within set. Boundaries are either surfaces (3d), edges (2d), or corners (1d).

Returns: List of element boundaries.

Definition at line 160 of file set.C.

References elementBoundaries.

◆ giveClassName()

const char * oofem::Set::giveClassName ( ) const

inlineoverridevirtual

Returns: Class name of the receiver.

Implements oofem::FEMComponent.

Definition at line 198 of file set.h.

◆ giveDofManProperties()

std::string oofem::Set::giveDofManProperties ( ) const

inline

Definition at line 182 of file set.h.

Referenced by oofem::Domain::initializeFinish().

◆ giveEdgeList()

const IntArray & oofem::Set::giveEdgeList ( )

Returns list of element edges within set (must be edges of 3D elements).

Returns: List of element edges.

Definition at line 162 of file set.C.

References elementEdges.

Referenced by oofem::EngngModel::assemble(), oofem::EngngModel::assembleVectorFromBC(), giveInputRecord(), and oofem::BCTracker::initialize().

◆ giveElementList()

const IntArray & oofem::Set::giveElementList ( )

Returns list of elements within set.

Returns: List of element numbers.

Definition at line 158 of file set.C.

References elements.

Referenced by oofem::EngngModel::assemble(), oofem::TransverseReinfConstraint::assemble(), oofem::Integral::assemble_lhs(), oofem::Integral::assemble_rhs(), oofem::PrescribedDispSlipBCNeumannRC::assembleOnReinfStress(), oofem::PrescribedDispSlipBCNeumannRC::assembleOnTransferStress(), oofem::TransverseReinfConstraint::assembleVector(), oofem::PrescribedDispSlipBCNeumannRC::assembleVectorBStress(), oofem::EngngModel::assembleVectorFromBC(), oofem::PrescribedDispSlipBCNeumannRC::assembleVectorRStress(), oofem::PrescribedDispSlipBCNeumannRC::computeInterfaceLength(), oofem::PrescribedDispSlipBCNeumannRC::computeWeightMatrix(), oofem::SPRNodalRecoveryModel::determinePatchAssemblyPoints(), oofem::SPRNodalRecoveryModel::determinePatchType(), oofem::MatlabExportModule::doOutputIntegrationPointFields(), oofem::VTKBaseExportModule::exportCellVars(), oofem::VTKBaseExportModule::exportSetMembership(), giveInputRecord(), oofem::PrescribedDispSlipBCNeumannRC::giveLocationArrays(), oofem::TransverseReinfConstraint::giveLocationArrays(), oofem::BCTracker::initialize(), oofem::Integral::initialize(), oofem::Domain::initializeFinish(), oofem::XfemManager::initiateFronts(), oofem::SPRNodalRecoveryModel::initPatch(), oofem::NodalRecoveryModel::initRegionNodeNumbering(), oofem::QuasicontinuumVTKXMLExportModule::initRegionNodeNumbering(), oofem::VTKBaseExportModule::initRegionNodeNumbering(), oofem::VTKXMLLatticeExportModule::initRegionNodeNumbering(), oofem::VTKXMLPeriodicExportModule::initRegionNodeNumbering(), oofem::EngngModel::outputElements(), oofem::Delamination::propagateFronts(), oofem::PLCZdamageRadius::propagateInterface(), oofem::NodalAveragingRecoveryModel::recoverValues(), oofem::ZZNodalRecoveryModel::recoverValues(), oofem::QuasicontinuumVTKXMLExportModule::setupVTKPiece(), oofem::VTKBaseExportModule::setupVTKPiece(), oofem::VTKXMLLatticeExportModule::setupVTKPiece(), oofem::VTKXMLPeriodicExportModule::setupVTKPiece(), and oofem::VTKXMLLatticeExportModule::setupVTKPieceCross().

◆ giveElementProperties()

std::string oofem::Set::giveElementProperties ( ) const

inline

Definition at line 181 of file set.h.

Referenced by oofem::Domain::initializeFinish().

◆ giveInputRecord()

void oofem::Set::giveInputRecord ( DynamicInputRecord & input )

overridevirtual

Setups the input record string of receiver.

Parameters

input Dynamic input record to be filled by receiver.

Reimplemented from oofem::FEMComponent.

Definition at line 105 of file set.C.

References _IFT_Set_elementBoundaries, _IFT_Set_elementEdges, _IFT_Set_elementprops, _IFT_Set_elements, _IFT_Set_elementSurfaces, _IFT_Set_internalElementNodes, _IFT_Set_Name, _IFT_Set_nodes, elementBoundaries, elementEdges, elementInternalNodes, elementprops, elements, elementSurfaces, giveBoundaryList(), giveEdgeList(), giveElementList(), giveInternalElementDofManagerList(), giveNodeList(), oofem::FEMComponent::giveNumber(), giveSurfaceList(), nodes, oofem::DynamicInputRecord::setField(), and oofem::DynamicInputRecord::setRecordKeywordField().

◆ giveInputRecordName()

const char * oofem::Set::giveInputRecordName ( ) const

inlineoverridevirtual

Returns: Input record name of the receiver.

Implements oofem::FEMComponent.

Definition at line 199 of file set.h.

References _IFT_Set_Name.

◆ giveInternalElementDofManagerList()

const IntArray & oofem::Set::giveInternalElementDofManagerList ( )

Returns list of internal element dof managers within set

Returns: List of internal element dofManagers.

Definition at line 166 of file set.C.

References elementInternalNodes.

Referenced by oofem::Domain::createDofs(), and giveInputRecord().

◆ giveNodeList()

const IntArray & oofem::Set::giveNodeList ( )

Returns list of all nodes within set. This list is computed automatically, based on all elements, boundaries, edges, and specified nodes within the set.

Returns: List of node numbers.

Definition at line 168 of file set.C.

References oofem::IntArray::at(), oofem::FEMComponent::domain, elementBoundaries, elementEdges, elements, elementSurfaces, nodalListInitialized, nodes, totalNodes, and oofem::IntArray::zero().

Referenced by oofem::PrimaryField::applyBoundaryCondition(), oofem::PrimaryField::applyInitialCondition(), oofem::EngngModel::assembleVectorFromBC(), oofem::TransportGradientDirichlet::computeXi(), oofem::Domain::createDofs(), oofem::MatlabExportModule::doOutputData(), oofem::MatlabExportModule::doOutputReactionForces(), oofem::VTKBaseExportModule::exportSetMembership(), oofem::PrescribedDispSlipBCDirichletRC::give(), giveInputRecord(), oofem::Domain::initializeFinish(), oofem::EngngModel::outputNodes(), oofem::DGProblem::postInitialize(), oofem::IncrementalLinearStatic::solveYourselfAt(), and oofem::PrescribedDispSlipBCDirichletRC::updateCoefficientMatrix().

◆ giveSpecifiedNodeList()

const IntArray & oofem::Set::giveSpecifiedNodeList ( )

Returns list of all directly specified nodes (excluding those generated from elements). This list is exactly the list given in the input.

Note: This is useful in for example, remeshing code, and should rarely be used elsewhere.

Returns: List of node numbers.

Definition at line 229 of file set.C.

References nodes.

Referenced by oofem::VTKBaseExportModule::exportSetMembership().

◆ giveSurfaceList()

const IntArray & oofem::Set::giveSurfaceList ( )

Returns list of element surfaces within set

Returns: List of element surfaces.

Definition at line 164 of file set.C.

References elementSurfaces.

Referenced by giveInputRecord().

◆ hasElement()

bool oofem::Set::hasElement ( int elem ) const

Return True if given element is contained.

Definition at line 245 of file set.C.

References elements, mElementListIsSorted, mElementsSorted, and oofem::FEMComponent::number.

Referenced by oofem::MMALeastSquareProjection::__init(), oofem::SPRNodalRecoveryModel::determinePatchAssemblyPoints(), oofem::VTKBaseExportModule::exportSetMembership(), oofem::OctreeSpatialLocalizer::giveClosestIP(), oofem::OctreeSpatialLocalizer::giveClosestIPWithinOctant(), oofem::OctreeSpatialLocalizer::giveElementContainingPoint(), oofem::Field::hasElementInSets(), and oofem::SPRNodalRecoveryModel::initPatch().

◆ initializeFrom()

void oofem::Set::initializeFrom ( InputRecord & ir )

overridevirtual

Initializes receiver according to object description stored in input record. This function is called immediately after creating object using constructor. Input record can be imagined as data record in component database belonging to receiver. Receiver may use value-name extracting functions to extract particular field from record. Note that initializeFrom may be called mutiple times.

See also: IR_GIVE_FIELD; IR_GIVE_OPTIONAL_FIELD

Parameters

ir	Input record to initialize from.
priority	Priority of the input record. This is used to determine the order of initialization

Reimplemented from oofem::FEMComponent.

Definition at line 58 of file set.C.

References _IFT_Set_allElements, _IFT_Set_allNodes, _IFT_Set_dofmanprops, _IFT_Set_elementBoundaries, _IFT_Set_elementEdges, _IFT_Set_elementprops, _IFT_Set_elementRanges, _IFT_Set_elements, _IFT_Set_elementSurfaces, _IFT_Set_internalElementNodes, _IFT_Set_nodeRanges, _IFT_Set_nodes, oofem::InputRecord::clone(), computeIntArray(), dofmanprops, elementBoundaries, elementEdges, elementInternalNodes, elementprops, elements, elementSurfaces, oofem::FEMComponent::giveDomain(), oofem::InputRecord::hasField(), IR_GIVE_OPTIONAL_FIELD, mElementListIsSorted, and nodes.

◆ restoreContext()

void oofem::Set::restoreContext	(	DataStream &	stream,
		ContextMode	mode )

overridevirtual

Restores the receiver state previously written in stream.

See also: saveContext

Parameters

stream	Input stream.
mode	Determines amount of info available in stream (state, definition, ...).

Exceptions

throws an ContextIOERR exception if error encountered.

Reimplemented from oofem::FEMComponent.

Definition at line 364 of file set.C.

References oofem::CIO_OK, CM_Definition, elementBoundaries, elementEdges, elementInternalNodes, elements, nodes, THROW_CIOERR, and totalNodes.

◆ saveContext()

void oofem::Set::saveContext	(	DataStream &	stream,
		ContextMode	mode )

overridevirtual

Stores receiver state to output stream.

Parameters

stream	Output stream.
mode	Determines amount of info required in stream (state, definition, ...).

Exceptions

throws an ContextIOERR exception if error encountered.

Reimplemented from oofem::FEMComponent.

Definition at line 340 of file set.C.

References oofem::CIO_OK, CM_Definition, elementBoundaries, elementEdges, elementInternalNodes, elements, nodes, and THROW_CIOERR.

◆ setBoundaryList()

void oofem::Set::setBoundaryList ( IntArray newBoundaries )

Sets list of element boundaries within set.

Definition at line 233 of file set.C.

References elementBoundaries.

◆ setEdgeList()

void oofem::Set::setEdgeList ( IntArray newEdges )

Sets list of element edges within set (must be edges of 3D elements).

Definition at line 235 of file set.C.

References elementEdges.

Referenced by oofem::TransportGradientDirichlet::computeXi().

◆ setElementList()

void oofem::Set::setElementList ( IntArray newElements )

Sets list of elements within set.

Definition at line 231 of file set.C.

References elements, and mElementListIsSorted.

Referenced by oofem::DGProblem::constructBoundaryEntities(), and oofem::Element::mapStateVariables().

◆ setNodeList()

void oofem::Set::setNodeList ( IntArray newNodes )

Sets list of nodes within set.

Definition at line 237 of file set.C.

References nodes.

Referenced by oofem::DGProblem::constructBoundaryEntities().

◆ updateLocalElementNumbering()

void oofem::Set::updateLocalElementNumbering ( EntityRenumberingFunctor & f )

Renumbering of nodes (could change due to load balancing).

Todo: Check order of element number and boundary number (same for edges)

Definition at line 290 of file set.C.

References elementBoundaries, elementEdges, elementInternalNodes, elements, oofem::ERS_Element, oofem::IntArray::followedBy(), mElementListIsSorted, OOFEM_WARNING, and oofem::IntArray::resize().

Referenced by updateLocalNumbering().

◆ updateLocalNodeNumbering()

void oofem::Set::updateLocalNodeNumbering ( EntityRenumberingFunctor & f )

Renumbering of nodes (could change due to load balancing).

Definition at line 271 of file set.C.

References oofem::ERS_DofManager, oofem::IntArray::followedBy(), nodes, and OOFEM_WARNING.

Referenced by updateLocalNumbering().

◆ updateLocalNumbering()

void oofem::Set::updateLocalNumbering ( EntityRenumberingFunctor & f )

overridevirtual

Local renumbering support. For some tasks (parallel load balancing, for example) it is necessary to renumber the entities. The various FEM components (such as nodes or elements) typically contain links to other entities in terms of their local numbers, etc. This service allows to update these relations to reflect updated numbering. The renumbering function is passed, which is supposed to return an updated number of specified entity type based on old number.

Reimplemented from oofem::FEMComponent.

Definition at line 265 of file set.C.

References updateLocalElementNumbering(), and updateLocalNodeNumbering().

Member Data Documentation

◆ dofmanprops

std::string oofem::Set::dofmanprops

protected

Dof manager properties.

Definition at line 94 of file set.h.

Referenced by initializeFrom().

◆ elementBoundaries

IntArray oofem::Set::elementBoundaries

protected

Definition at line 87 of file set.h.

Referenced by clear(), giveBoundaryList(), giveInputRecord(), giveNodeList(), initializeFrom(), restoreContext(), saveContext(), setBoundaryList(), and updateLocalElementNumbering().

◆ elementEdges

IntArray oofem::Set::elementEdges

protected

Element numbers + boundary numbers (interleaved).

Definition at line 88 of file set.h.

Referenced by clear(), giveEdgeList(), giveInputRecord(), giveNodeList(), initializeFrom(), restoreContext(), saveContext(), setEdgeList(), and updateLocalElementNumbering().

◆ elementInternalNodes

IntArray oofem::Set::elementInternalNodes

protected

Element numbers + surface numbers (interleaved).

Definition at line 90 of file set.h.

Referenced by clear(), giveInputRecord(), giveInternalElementDofManagerList(), initializeFrom(), restoreContext(), saveContext(), and updateLocalElementNumbering().

◆ elementprops

std::string oofem::Set::elementprops

protected

Element properties.

Definition at line 93 of file set.h.

Referenced by giveInputRecord(), initializeFrom(), and Set().

◆ elements

IntArray oofem::Set::elements

protected

Element numbers.

Definition at line 84 of file set.h.

Referenced by addAllElements(), clear(), giveElementList(), giveInputRecord(), giveNodeList(), hasElement(), initializeFrom(), restoreContext(), saveContext(), setElementList(), and updateLocalElementNumbering().

◆ elementSurfaces

IntArray oofem::Set::elementSurfaces

protected

Element numbers + edge numbers (interleaved).

Definition at line 89 of file set.h.

Referenced by giveInputRecord(), giveNodeList(), giveSurfaceList(), and initializeFrom().

◆ mElementListIsSorted

bool oofem::Set::mElementListIsSorted

mutableprotected

Definition at line 85 of file set.h.

Referenced by addAllElements(), hasElement(), initializeFrom(), Set(), setElementList(), and updateLocalElementNumbering().

◆ mElementsSorted

IntArray oofem::Set::mElementsSorted

mutableprotected

Definition at line 86 of file set.h.

Referenced by hasElement().

◆ nodalListInitialized

bool oofem::Set::nodalListInitialized = false

protected

Definition at line 99 of file set.h.

Referenced by giveNodeList().

◆ nodes

IntArray oofem::Set::nodes

protected

Element numbers + internal dof manager numbers (interleaved).

Node numbers.

Definition at line 91 of file set.h.

Referenced by clear(), giveInputRecord(), giveNodeList(), giveSpecifiedNodeList(), initializeFrom(), restoreContext(), saveContext(), setNodeList(), and updateLocalNodeNumbering().

◆ totalNodes

IntArray oofem::Set::totalNodes

protected

Unique set of nodes (computed).

Definition at line 92 of file set.h.

Referenced by clear(), giveNodeList(), and restoreContext().

The documentation for this class was generated from the following files:

set.h
set.C

Public Member Functions

Protected Member Functions

Protected Attributes

Detailed Description

Constructor & Destructor Documentation

◆ Set()

◆ ~Set()

Member Function Documentation

◆ addAllElements()

◆ clear()

◆ computeIntArray()

◆ giveBoundaryList()

◆ giveClassName()

◆ giveDofManProperties()

◆ giveEdgeList()

◆ giveElementList()

◆ giveElementProperties()

◆ giveInputRecord()

◆ giveInputRecordName()

◆ giveInternalElementDofManagerList()

◆ giveNodeList()

◆ giveSpecifiedNodeList()

◆ giveSurfaceList()

◆ hasElement()

◆ initializeFrom()

◆ restoreContext()

◆ saveContext()

◆ setBoundaryList()

◆ setEdgeList()

◆ setElementList()

◆ setNodeList()

◆ updateLocalElementNumbering()

◆ updateLocalNodeNumbering()

◆ updateLocalNumbering()

Member Data Documentation

◆ dofmanprops

◆ elementBoundaries

◆ elementEdges

◆ elementInternalNodes

◆ elementprops

◆ elements

◆ elementSurfaces

◆ mElementListIsSorted

◆ mElementsSorted

◆ nodalListInitialized

◆ nodes

◆ totalNodes