#include <vtkxmlperiodicexportmodule.h>

Inheritance diagram for oofem::VTKXMLPeriodicExportModule:

Collaboration diagram for oofem::VTKXMLPeriodicExportModule:

Public Member Functions
	VTKXMLPeriodicExportModule (int n, EngngModel *e)
	Constructor. Creates empty Output Manager. By default all components are selected.
virtual	~VTKXMLPeriodicExportModule ()
	Destructor.
void	initializeFrom (InputRecord &ir) override
	Initializes receiver according to object description stored in input record.
const char *	giveClassName () const override
	Returns class name of the receiver.
void	setupVTKPiece (ExportRegion &vtkPiece, TimeStep *tStep, Set &region) override
int	initRegionNodeNumbering (ExportRegion &piece, Domain domain, TimeStep tStep, Set &region) override
void	exportPrimaryVars (ExportRegion &vtkPiece, Set &region, IntArray &primaryVarsToExport, NodalRecoveryModel &smoother, TimeStep *tStep) override
void	exportIntVars (ExportRegion &vtkPiece, Set &region, IntArray &internalVarsToExport, NodalRecoveryModel &smoother, TimeStep *tStep) override
Public Member Functions inherited from oofem::VTKXMLExportModule
	VTKXMLExportModule (int n, EngngModel *e)
	Constructor. Creates empty Output Manager. By default all components are selected.
virtual	~VTKXMLExportModule ()
	Destructor.
void	doOutput (TimeStep *tStep, bool forcedOutput=false) override
void	initialize () override
void	terminate () override
void	exportPointDataHeader (std::ofstream fileStream, TimeStep *tStep)
virtual void	giveDataHeaders (std::string &pointHeader, std::string &cellHeader)
NodalRecoveryModel *	giveSmoother ()
	Returns the internal smoother.
NodalRecoveryModel *	givePrimVarSmoother ()
	Returns the smoother for primary variables (nodal averaging).
ExportRegion &	getExportRegions ()
Public Member Functions inherited from oofem::VTKBaseExportModule
	VTKBaseExportModule (int n, EngngModel *e)
	Constructor. Creates empty Output Manager. By default all components are selected.
virtual	~VTKBaseExportModule ()
	Destructor.
int	giveCellType (Element *element)
int	giveCellType (int num)
Public Member Functions inherited from oofem::ExportModule
	ExportModule (int n, EngngModel *e)
	Constructor. Creates empty Output Manager with number n.
virtual	~ExportModule ()
	Destructor.
void	doForcedOutput (TimeStep *tStep)
bool	testSubStepOutput ()
virtual void	initializeElementSet ()

Protected Member Functions
void	giveSwitches (IntArray &answer, int location)
Protected Member Functions inherited from oofem::VTKXMLExportModule
std::string	giveOutputFileName (TimeStep *tStep)
	Returns the filename for the given time step.
std::ofstream	giveOutputStream (TimeStep *tStep)
	Returns the output stream for given solution step.
void	writeIntVars (ExportRegion &vtkPiece)
void	writeXFEMVars (ExportRegion &vtkPiece)
void	writePrimaryVars (ExportRegion &vtkPiece)
void	writeCellVars (ExportRegion &vtkPiece)
void	writeExternalForces (ExportRegion &vtkPiece)
void	writeVertexSetMembership (ExportRegion &vtkPiece)
void	writeCellSetMembership (ExportRegion &vtkPiece)
bool	writeVTKPieceEpilog (ExportRegion &vtkPiece, TimeStep *tStep)
bool	writeVTKPieceVariables (ExportRegion &vtkPiece, TimeStep *tStep)
bool	writeVTKPieceProlog (ExportRegion &vtkPiece, TimeStep *tStep)
void	exportIntVarsInGpAs (IntArray valIDs, TimeStep *tStep)
void	writeVTKCollection ()
void	writeGPVTKCollection ()
	Writes a VTK collection file for Gauss points.
void	writeVTKPointData (FloatArray &valueArray)
void	writeVTKCellData (FloatArray &valueArray)
void	exportCompositeElement (ExportRegion &vtkPiece, Element el, TimeStep tStep)
void	exportCompositeElement (std::vector< ExportRegion > &vtkPieces, Element el, TimeStep tStep)
Protected Member Functions inherited from oofem::VTKBaseExportModule
void	exportExternalForces (ExportRegion &piece, int region, TimeStep *tStep)
void	exportCellVars (ExportRegion &piece, Set &region, IntArray &cellVarsToExport, TimeStep *tStep)
	Exports cell variables (typically internal variables).
void	exportExternalForces (ExportRegion &piece, Set &region, IntArray &externalForcesToExport, TimeStep *tStep)
void	exportSetMembership (ExportRegion &piece, Set &region, TimeStep *tStep)
void	getNodalVariableFromPrimaryField (FloatArray &answer, DofManager dman, TimeStep tStep, UnknownType type, Set &region, NodalRecoveryModel &smoother)
void	getNodalVariableFromIS (FloatArray &answer, Node node, TimeStep tStep, InternalStateType type, Set &region, NodalRecoveryModel &smoother)
void	getCellVariableFromIS (FloatArray &answer, Element el, InternalStateType type, TimeStep tStep)
int	giveNumberOfNodesPerCell (int cellType)
void	giveElementCell (IntArray &answer, Element *elem)
bool	isElementComposite (Element *elem)
void	exportCompositeElement (ExportRegion &vtkPiece, Element el, TimeStep tStep)
	Returns true if element geometry type is composite (not a single cell).
void	exportCompositeElement (std::vector< ExportRegion > &vtkPieces, Element el, TimeStep tStep)
Protected Member Functions inherited from oofem::ExportModule
int	giveNumberOfRegions ()
	Returns number of regions (aka regionSets).
Set *	giveRegionSet (int i)
	Returns element set.
std::string	giveOutputBaseFileName (TimeStep *tStep)
bool	testTimeStepOutput (TimeStep *tStep)
bool	testDomainOutput (int n)
std::string	errorInfo (const char *func) const
	Returns string for prepending output (used by error reporting macros).

Protected Attributes
FloatMatrix	uniqueNodeTable
IntArray	periodicMap
IntArray	regionToUniqueMap
IntArray	locationMap
IntArray	elementNodePeriodicMap
int	elemNodes
Protected Attributes inherited from oofem::VTKXMLExportModule
IntArray	internalVarsToExport
	List of InternalStateType values, identifying the selected vars for export.
IntArray	primaryVarsToExport
	List of primary unknowns to export.
IntArray	externalForcesToExport
	List of primary unknowns to export.
IntArray	cellVarsToExport
	List of cell data to export.
IntArray	ipInternalVarsToExport
	List of internal variables to export directly in Integration Points (no smoothing to nodes).
bool	exportSetMembershipFlag =0
	Flag whether to export setMembership (byte encoded array).
NodalRecoveryModel::NodalRecoveryModelType	stype
	Smoother type.
std::unique_ptr< NodalRecoveryModel >	smoother
	Smoother.
std::unique_ptr< NodalRecoveryModel >	primVarSmoother
	Smoother for primary variables.
std::list< std::string >	pvdBuffer
	Buffer for earlier time steps exported to *.pvd file.
std::list< std::string >	gpPvdBuffer
	Buffer for earlier time steps with gauss points exported to *.gp.pvd file.
Protected Attributes inherited from oofem::ExportModule
int	number
	Component number.
EngngModel *	emodel
	Problem pointer.
bool	tstep_all_out_flag
	Indicates all steps selection.
int	tstep_step_out
	User timeStep Output step. Indicates every tstep_step_out-th step selected.
std ::list< Range >	tsteps_out
	List of user selected step numbers.
bool	tstep_substeps_out_flag
bool	domain_all_flag
	Indicates all domains.
IntArray	domainMask
	Domain selection mask.
IntArray	regionSets
	regions represented by sets
double	timeScale
	Scaling time in output, e.g. conversion from seconds to hours.
Set	defaultElementSet
	Default region set.
bool	pythonExport
	Output is carried out as a python list instead of writing files.

Additional Inherited Members
Static Public Member Functions inherited from oofem::VTKBaseExportModule
static void	computeIPAverage (FloatArray &answer, IntegrationRule iRule, Element elem, InternalStateType isType, TimeStep *tStep)
Public Attributes inherited from oofem::VTKXMLExportModule
std::ofstream	fileStream
ExportRegion	defaultVTKPiece
std::vector< ExportRegion >	defaultVTKPieces
Static Protected Member Functions inherited from oofem::VTKBaseExportModule
static void	makeFullTensorForm (FloatArray &answer, const FloatArray &reducedForm, InternalStateValueType vtype)
	Gives the full form of given symmetrically stored tensors, missing components are filled with zeros.
Static Protected Attributes inherited from oofem::VTKBaseExportModule
static IntArray	redToFull
	Map from Voigt to full tensor.

Detailed Description

Represents VTK (Visualization Toolkit) export module for periodic cells. It uses VTK (.vtu) file format It extends vtkxmlexportmodule by introducing methods to deal with boundary elements.

Author: : Ignatios Athanasiadis, Adam Sciegaj, Peter Grassl

Definition at line 56 of file vtkxmlperiodicexportmodule.h.

Constructor & Destructor Documentation

◆ VTKXMLPeriodicExportModule()

oofem::VTKXMLPeriodicExportModule::VTKXMLPeriodicExportModule	(	int	n,
		EngngModel *	e )

Constructor. Creates empty Output Manager. By default all components are selected.

References initializeFrom(), and VTKXMLPeriodicExportModule().

Referenced by VTKXMLPeriodicExportModule().

◆ ~VTKXMLPeriodicExportModule()

oofem::VTKXMLPeriodicExportModule::~VTKXMLPeriodicExportModule ( )

virtual

Destructor.

Definition at line 66 of file vtkxmlperiodicexportmodule.C.

Member Function Documentation

◆ exportIntVars()

void oofem::VTKXMLPeriodicExportModule::exportIntVars	(	ExportRegion &	piece,
		Set &	region,
		IntArray &	internalVarsToExport,
		NodalRecoveryModel &	smoother,
		TimeStep *	tStep )

overridevirtual

Export internal variables by smoothing.

Reimplemented from oofem::VTKBaseExportModule.

Definition at line 566 of file vtkxmlperiodicexportmodule.C.

References oofem::IntArray::at(), oofem::ExportModule::emodel, oofem::ExportRegion::getMapL2G(), oofem::VTKBaseExportModule::getNodalVariableFromIS(), oofem::giveInternalStateTypeSize(), oofem::giveInternalStateValueType(), oofem::Domain::giveNode(), oofem::Domain::giveNumberOfDofManagers(), oofem::IntArray::giveSize(), oofem::VTKXMLExportModule::internalVarsToExport, periodicMap, regionToUniqueMap, oofem::FloatArray::resize(), oofem::ExportRegion::setInternalVarInNode(), oofem::ExportRegion::setNumberOfInternalVarsToExport(), oofem::VTKXMLExportModule::smoother, and oofem::FloatArray::zero().

Referenced by setupVTKPiece().

◆ exportPrimaryVars()

void oofem::VTKXMLPeriodicExportModule::exportPrimaryVars	(	ExportRegion &	piece,
		Set &	region,
		IntArray &	primaryVarsToExport,
		NodalRecoveryModel &	smoother,
		TimeStep *	tStep )

overridevirtual

Export primary variables.

Reimplemented from oofem::VTKBaseExportModule.

Definition at line 443 of file vtkxmlperiodicexportmodule.C.

References oofem::FloatArray::at(), oofem::IntArray::at(), oofem::IntArray::begin(), oofem::ExportModule::emodel, oofem::IntArray::end(), oofem::ExportRegion::getMapL2G(), oofem::VTKBaseExportModule::getNodalVariableFromPrimaryField(), oofem::DofManager::giveCompleteMasterDofIDArray(), oofem::DofManager::giveCoordinate(), oofem::DofManager::giveCoordinates(), oofem::DofManager::giveDofWithID(), oofem::Domain::giveNode(), oofem::Domain::giveNumberOfDofManagers(), oofem::DofManager::giveNumberOfDofs(), oofem::FloatArray::giveSize(), oofem::IntArray::giveSize(), giveSwitches(), oofem::Dof::giveUnknown(), locationMap, OOFEM_ERROR, periodicMap, oofem::VTKXMLExportModule::primaryVarsToExport, regionToUniqueMap, oofem::FloatArray::resize(), oofem::ExportRegion::setNumberOfPrimaryVarsToExport(), oofem::ExportRegion::setPrimaryVarInNode(), and oofem::VTKXMLExportModule::smoother.

Referenced by setupVTKPiece().

◆ giveClassName()

const char * oofem::VTKXMLPeriodicExportModule::giveClassName ( ) const

inlineoverridevirtual

Returns class name of the receiver.

Reimplemented from oofem::VTKXMLExportModule.

Definition at line 75 of file vtkxmlperiodicexportmodule.h.

◆ giveSwitches()

void oofem::VTKXMLPeriodicExportModule::giveSwitches	(	IntArray &	answer,
		int	location )

protected

Definition at line 78 of file vtkxmlperiodicexportmodule.C.

References oofem::IntArray::resize(), and oofem::IntArray::zero().

Referenced by exportPrimaryVars().

◆ initializeFrom()

void oofem::VTKXMLPeriodicExportModule::initializeFrom ( InputRecord & ir )

overridevirtual

Initializes receiver according to object description stored in input record.

Reimplemented from oofem::VTKXMLExportModule.

Definition at line 71 of file vtkxmlperiodicexportmodule.C.

Referenced by VTKXMLPeriodicExportModule().

◆ initRegionNodeNumbering()

int oofem::VTKXMLPeriodicExportModule::initRegionNodeNumbering	(	ExportRegion &	vtkPiece,
		Domain *	domain,
		TimeStep *	tStep,
		Set &	region )

overridevirtual

Assembles the region node map. Also computes the total number of nodes in region. The region are numbered starting from offset+1. If mode == 0 then regionNodalNumbers is array with mapping from global numbering to local region numbering. The i-th value contains the corresponding local region number (or zero, if global number is not in region). If mode == 1 then regionNodalNumbers is array with mapping from local to global numbering. The i-th value contains the corresponding global node number.

Reimplemented from oofem::VTKBaseExportModule.

Definition at line 227 of file vtkxmlperiodicexportmodule.C.

References oofem::FloatArray::at(), oofem::IntArray::at(), oofem::Element_local, elemNodes, oofem::ExportRegion::getMapG2L(), oofem::ExportRegion::getMapL2G(), oofem::Domain::giveElement(), oofem::Set::giveElementList(), oofem::Element::giveLocation(), oofem::Element::giveNode(), oofem::FEMComponent::giveNumber(), oofem::Domain::giveNumberOfDofManagers(), oofem::Element::giveNumberOfNodes(), oofem::Element::giveParallelMode(), oofem::IntArray::giveSize(), oofem::Element::isActivated(), oofem::VTKBaseExportModule::isElementComposite(), locationMap, periodicMap, oofem::Element::recalculateCoordinates(), regionToUniqueMap, oofem::IntArray::resize(), oofem::IntArray::resizeWithValues(), oofem::ExportRegion::setNumberOfCells(), oofem::ExportRegion::setNumberOfNodes(), uniqueNodeTable, and oofem::IntArray::zero().